Control track and group visibility more selectively below.
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| Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
| Assembly |
| Assembly |
| Gap |
| Gap |
| GC Percent |
| GC Percent in 5-Base Windows |
| Chromosome Band |
| Ideogram |
| Short Match |
| Perfect Matches to Short Sequence () |
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| Ensembl genes |
| Ensembl genes from Arabidopsis_thaliana.TAIR10.18.gtf.gz |
| Genscan Genes |
| Genscan Gene Predictions |
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| CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
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| lastz braRap1 |
| lastz chain to braRap1 |
| blat braRap1 |
| lift-over blat to braRap1 |
| blat ricCom1 |
| lift-over blat to ricCom1 |
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| RepeatMasker |
| Repeating Elements by RepeatMasker |
| WM + SDust |
| Genomic Intervals Masked by WindowMasker + SDust |
| Simple Repeats |
| Simple Tandem Repeats by TRF |
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